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The configuration file can be used to change the rooting method, the orthology prediction method, printing information or to limit the number of pruned trees allowed during the use of TreeKO. Detailed information about the configuration file can be found [[configuration_file|here]]. | The configuration file can be used to change the rooting method, the orthology prediction method, printing information or to limit the number of pruned trees allowed during the use of TreeKO. Detailed information about the configuration file can be found [[configuration_file|here]]. | ||
+ | |||
+ | ---- | ||
+ | |||
+ | * [[start|Starting page]] | ||
+ | * [[documentation|How to run treeKO]] | ||
+ | * [[Algorithm|Algorithm]] | ||
+ | * [[output | Output Files]] | ||
+ | * [[configuration_file | Configuration File]] | ||
+ | * [[downloads|Downloads]] | ||
+ | * [[about | About]] |